Sample: 4440441.3


Sample Name 4440441.3 
Sample Type
Project Human lung healthy vs cystic fibrosis metagenome
Investigators (0) N/A
URL N/A
Description
Sample Accession cobian31_4440441.3
Assembly  

Latitude 32.8781  
Longitude 117.1072  
Country United States of America  

Mgrast metagenome id 4440441.3  

Sequencing method 454  
Sample prep method CsCl + DNA extraction + phi29 amplification  
Original nucleic acids type DNA  

Sample description CFLungPat001Rep3SDVir20060505  
Sample name 4440441.3  

Type #Seqs #BP Avg. Len. %GC Location
Reads 92,223 7,443,318 81 40.95  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.050.upload.fna
CDS  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.350.genecalling.faa
Preprocess.passed.fna 90,410 7,250,882 80 41.04  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.100.preprocess.passed.fna
Preprocess.removed.fna 1,813 192,522 106 37.46  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.100.preprocess.removed.fna
Dereplication.passed.fna 86,588 6,941,760 80 41.01  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.150.dereplication.passed.fna
Dereplication.removed.fna 3,820 308,541 81 41.86  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.150.dereplication.removed.fna
Screen.passed.fna 57,105 4,768,268 84 40.06  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.299.screen.passed.fna
Rna.filter.fna 26,547 2,058,985 78 40.13  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.425.rna.filter.fna
Cluster.rna97.fna 24,974 1,944,476 78 40.02  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.440.cluster.rna97.fna
Cluster.rna97.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.440.cluster.rna97.mapping
Cluster.aa90.faa  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.550.cluster.aa90.faa
Cluster.aa90.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.550.cluster.aa90.mapping
Annotation.sims.filter.seq  /iplant/home/shared/imicrobe/projects/151/samples/3515/mgm4440441.3.700.annotation.sims.filter.seq


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