Sample: 4440051.3


Sample Name 4440051.3 
Sample Type
Project Human lung healthy vs cystic fibrosis metagenome
Investigators (0) N/A
URL N/A
Description
Sample Accession cobian31_4440051.3
Assembly  

Latitude 32.8781  
Longitude -117.1072  
Country United States of America  

Mgrast metagenome id 4440051.3  

Sequencing method 454  
Sample prep method CsCl + DNA extraction + phi29 amplification  
Original nucleic acids type DNA  

Sample description CFLungPat001Rep2SDVir20060505  
Sample name 4440051.3  

Type #Seqs #BP Avg. Len. %GC Location
Reads 838,932 87,735,509 105 39.32  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.050.upload.fna
CDS  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.350.genecalling.faa
Preprocess.passed.fna 795,718 83,820,934 105 39.48  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.100.preprocess.passed.fna
Preprocess.removed.fna 43,214 3,915,621 91 35.93  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.100.preprocess.removed.fna
Dereplication.passed.fna 715,608 75,453,708 105 39.46  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.150.dereplication.passed.fna
Dereplication.removed.fna 80,108 8,364,877 104 39.66  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.150.dereplication.removed.fna
Screen.passed.fna 261,924 28,122,780 107 39.08  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.299.screen.passed.fna
Rna.filter.fna 157,951 16,471,130 104 38.46  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.425.rna.filter.fna
Cluster.rna97.fna 2 156 78 51.28  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.440.cluster.rna97.fna
Cluster.rna97.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.440.cluster.rna97.mapping
Rna.sims  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.450.rna.sims
Cluster.aa90.faa  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.550.cluster.aa90.faa
Cluster.aa90.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.550.cluster.aa90.mapping
Protein.sims  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.650.protein.sims
Annotation.sims.filter.seq  /iplant/home/shared/imicrobe/projects/151/samples/3514/mgm4440051.3.700.annotation.sims.filter.seq


N/A