Sample: 4440026.3


Sample Name 4440026.3 
Sample Type
Project Human lung healthy vs cystic fibrosis metagenome
Investigators (0) N/A
URL N/A
Description
Sample Accession cobian31_4440026.3
Assembly  

Latitude 32.8781  
Longitude -117.1072  
Country United States of America  

Mgrast metagenome id 4440026.3  

Sequencing method 454  
Sample prep method CsCl + DNA extraction + phi29 amplification  
Original nucleic acids type DNA  

Sample description CFLungPat001Rep1SDVir20060505  
Sample name 4440026.3  

Type #Seqs #BP Avg. Len. %GC Location
Reads 50,909 4,090,538 80 40.41  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.050.upload.fna
CDS  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.350.genecalling.faa
Preprocess.passed.fna 49,961 3,986,888 80 40.53  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.100.preprocess.passed.fna
Preprocess.removed.fna 948 103,683 109 36.09  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.100.preprocess.removed.fna
Dereplication.passed.fna 46,588 3,733,562 80 40.48  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.150.dereplication.passed.fna
Dereplication.removed.fna 3,372 253,237 75 41.24  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.150.dereplication.removed.fna
Screen.passed.fna 28,171 2,363,547 84 39.78  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.299.screen.passed.fna
Rna.filter.fna 14,378 1,108,112 77 39.68  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.425.rna.filter.fna
Cluster.rna97.fna 13,115 1,017,855 78 39.5  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.440.cluster.rna97.fna
Cluster.rna97.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.440.cluster.rna97.mapping
Rna.sims  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.450.rna.sims
Cluster.aa90.faa  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.550.cluster.aa90.faa
Cluster.aa90.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.550.cluster.aa90.mapping
Protein.sims  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.650.protein.sims
Annotation.sims.filter.seq  /iplant/home/shared/imicrobe/projects/151/samples/3513/mgm4440026.3.700.annotation.sims.filter.seq


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