Sample: 4440442.5


Sample Name 4440442.5 
Sample Type
Project Human lung healthy vs cystic fibrosis metagenome
Investigators (0) N/A
URL N/A
Description
Sample Accession cobian31_4440442.5
Assembly  

Latitude 32.8781  
Longitude -117.2256  
Country United States of America  

Mgrast metagenome id 4440442.5  

Sequencing method 454  
Sample prep method CsCl + DNA extraction + phi29 amplification  
Original nucleic acids type DNA  

Sample description HealSputRep2SDVir20060707  
Sample name 4440442.5  

Type #Seqs #BP Avg. Len. %GC Location
Reads 770,825 80,666,836 105 39.98  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.050.upload.fna
CDS  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.350.genecalling.faa
Preprocess.passed.fna 731,102 77,043,529 105 40.15  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.100.preprocess.passed.fna
Preprocess.removed.fna 39,723 3,616,779 91 36.17  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.100.preprocess.removed.fna
Dereplication.passed.fna 699,122 73,680,468 105 40.19  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.150.dereplication.passed.fna
Dereplication.removed.fna 31,979 3,363,551 105 39.39  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.150.dereplication.removed.fna
Screen.passed.fna 300,546 32,251,591 107 39.14  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.299.screen.passed.fna
Rna.filter.fna 157,816 16,319,753 103 39.53  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.425.rna.filter.fna
Cluster.rna97.fna 142,615 14,756,374 103 39.57  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.440.cluster.rna97.fna
Cluster.rna97.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.440.cluster.rna97.mapping
Rna.sims  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.450.rna.sims
Cluster.aa90.faa  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.550.cluster.aa90.faa
Cluster.aa90.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.550.cluster.aa90.mapping
Protein.sims  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.650.protein.sims
Annotation.sims.filter.seq  /iplant/home/shared/imicrobe/projects/151/samples/3512/mgm4440442.5.700.annotation.sims.filter.seq


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