Sample: 4440442.4


Sample Name 4440442.4 
Sample Type
Project Human lung healthy vs cystic fibrosis metagenome
Investigators (0) N/A
URL N/A
Description
Sample Accession cobian31_4440442.4
Assembly  

Latitude 32.8781  
Longitude -117.2256  
Country United States of America  

Mgrast metagenome id 4440442.4  

Sequencing method 454  
Sample prep method CsCl + DNA extraction + phi29 amplification  
Original nucleic acids type DNA  

Sample description HealSputRep3SDVir20060707  
Sample name 4440442.4  

Type #Seqs #BP Avg. Len. %GC Location
Reads 39,807 3,375,634 85 41.7  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.050.upload.fna
CDS  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.350.genecalling.faa
Preprocess.passed.fna 39,011 3,304,232 85 41.77  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.100.preprocess.passed.fna
Preprocess.removed.fna 796 71,075 89 38.72  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.100.preprocess.removed.fna
Dereplication.passed.fna 37,606 3,188,613 85 41.75  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.150.dereplication.passed.fna
Dereplication.removed.fna 1,404 115,928 83 42.34  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.150.dereplication.removed.fna
Screen.passed.fna 27,824 2,429,313 87 40.61  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.299.screen.passed.fna
Rna.filter.fna 11,103 897,344 81 40.98  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.425.rna.filter.fna
Cluster.rna97.fna 10,133 826,245 82 40.98  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.440.cluster.rna97.fna
Cluster.rna97.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.440.cluster.rna97.mapping
Rna.sims  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.450.rna.sims
Cluster.aa90.faa  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.550.cluster.aa90.faa
Cluster.aa90.mapping  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.550.cluster.aa90.mapping
Protein.sims  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.650.protein.sims
Annotation.sims.filter.seq  /iplant/home/shared/imicrobe/projects/151/samples/3511/mgm4440442.4.700.annotation.sims.filter.seq


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