Sample: MMETSP0088


Sample Name MMETSP0088 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Chaetoceros affinis CCMP159

Sample Accession CAM_SMPL_003276
Assembly  
Combined Assembly Chaetoceros-affinis-CCMP159
Taxon ID 426623

Ph 8.3  
Phosphate 36  
Nitrate 571  
Axenic No  
Trace elements 1000  
Experimental salinity 32  
Carbon dioxide 400  

Growth medium L1  
Modifications to growth medium 16N:1P  

NCBI SRA SRS616882  

Latitude 29.42  
Longitude -86.1  

Project id 104  
Clonal 1  
Date of experiment 18-OCT-11  
External sample id Ca, replete, modern CO2  
Investigation type EU  
Principle investigator Sonya Dyhrman, Andrew Juhl  

GenBank BioSample 2740401  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP008/MMETSP0088.fastq.tar  

Day portion of day night cycle in hours 14  
Light 100  
Experimental temperature 18  
Night portion of day night cycle in hours 10  

Library acc CAM_LIB_002067  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_001087  
Combined assembly name Chaetoceros-affinis-CCMP159  
Pcr amp No  

Source mat id (MMETSP0088) Chaetoceros affinis  
Source mat id CAM_BM_003331  
Source mat id CAM_SMPL_003276  
Sample type eukaryotes  
Sample description Chaetoceros affinis CCMP159  
Sample name MMETSP0088  
Taxon id 426623  

Strain CCMP159  
Genus Chaetoceros  
Species affinis  
Family Chaetocerotaceae  
Order Chaetocerotales  
Superkingdom Eukaryota  
Class Coscinodiscophyceae  
Phylum Bacillariophyta  

N/A