Sample: MMETSP1424


Sample Name MMETSP1424 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Oxyrrhis marina LB1974

Sample Accession CAM_SMPL_003183
Assembly  
Combined Assembly Oxyrrhis-marina-LB1974
Taxon ID 2969

Prey organism if applicable Phaeodactylum tricornutum  

Ph 8.3  
Axenic No  
Experimental salinity 34  

Growth medium Sterile coastal sea-water  

NCBI SRA SRS621562  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Habitat marine habitat  

Site name Pacific_Ocean  
Site description La Jolla, CA, net tow from SOI pier, by R.A. Lewin  
Country UNITED STATES  
Country US  
Sample collection site Pacific_Ocean  
Other collection site info La Jolla, CA, net tow from SOI pier, by R.A. Lewin  

Project id 104  
Collection start time 1966-05-01 00:00:00.0  
Collection stop time 1966-05-01 00:00:00.0  
Clonal No  
Collection date 01-MAY-66  
Date of experiment 24-OCT-11  
External sample id Oxy-PtWT_20min  
Investigation type EU  
Principle investigator Matthew Johnson  
Primary citation Dujardin, F. (1841). Histoire naturelle des Zoophytes, Infusoires, comprenant la physiologie et la clasification de ces animaux et la manière de les étudier à l'aide du microscope. pp. i-xii, 1-684. Paris: Librarie Encyclopédique de Roret.  

GenBank BioSample 2739989  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP142/MMETSP1424.fastq.tar  

Day portion of day night cycle in hours 14  
Light 20  
Experimental temperature 18  
Night portion of day night cycle in hours 10  

Library acc CAM_LIB_001929  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000901  
Combined assembly name Oxyrrhis-marina-LB1974  
Pcr amp No  

Source mat id (MMETSP1424) Oxyrrhis marina - seawater  
Source mat id CAM_BM_003203  
Source mat id CAM_SMPL_003183  
Sample type eukaryotes  
Sample description Oxyrrhis marina LB1974  
Sample name MMETSP1424  
Taxon id 2969  
Sample material seawater  

Strain LB1974  
Genus Oxyrrhis  
Species marina  
Family Oxyrrhinaceae  
Order Oxyrrhinales  
Superkingdom Eukaryota  
Class Dinophyceae  
Phylum Dinophyta  

N/A