Sample: MMETSP1390


Sample Name MMETSP1390 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Micromonas sp. CCMP2099

Sample Accession CAM_SMPL_003148
Assembly  
Combined Assembly Micromonas-sp-CCMP2099
Taxon ID 38833

Ph 8.2  
Phosphate 36  
Nitrate 882  
Axenic No  
Trace elements 12780  
Experimental salinity 35  

Longhurst province BPLR  

Growth medium L1-Si amended natural seawater (Eastern Pacific)  
Modifications to growth medium L1 for all nutrients except omitted silicate  

NCBI SRA SRS621531  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Habitat marine habitat  

Site name Arctic  
Latitude 76.2833  
Longitude -74.75  
Site description Baffin Bay  
Country CA  
Country CANADA  
Depth 55  
Sample collection site Arctic  
Other collection site info Baffin Bay  

Project id 104  
Collection start time 1998-04-07 00:00:00.0  
Collection stop time 1998-04-07 00:00:00.0  
Clonal Unknown  
Collection date 07-APR-98  
Date of experiment 09-NOV-10  
External sample id temp_d4  
Investigation type EU  
Principle investigator Alexandra Z. Worden  
Primary citation DOI: 10.1111/j.1529-8817.2006.00310.x  

GenBank BioSample 2740145  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP139/MMETSP1390.fastq.tar  

Day portion of day night cycle in hours 14  
Light 80  
Experimental temperature 12.5  
Night portion of day night cycle in hours 10  

Library acc CAM_LIB_001894  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000866  
Combined assembly name Micromonas-sp-CCMP2099  
Pcr amp No  

Source mat id (MMETSP1390) Micromonas sp. - seawater  
Source mat id 3579  
Source mat id CAM_BM_003168  
Source mat id CAM_SMPL_003148  
Sample type eukaryotes  
Sample description Micromonas sp. CCMP2099  
Sample name MMETSP1390  
Taxon id 38833  
Sample material seawater  

Strain CCMP2099  
Genus Micromonas  
Species sp.  
Family Mamiellaceae  
Order Mamiellales  
Superkingdom Eukaryota  
Class Prasinophyceae  
Phylum Chlorophyta  

N/A