Sample: MMETSP1091


Sample Name MMETSP1091 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Rhodomonas sp. CCMP768

Sample Accession CAM_SMPL_003073
Assembly  
Combined Assembly Rhodomonas-sp-CCMP768
Taxon ID 302021

Prey organism if applicable n/a  

Ph 8.2  
Phosphate 36  
Nitrate 882  
Axenic No  
Trace elements 12795  
Experimental salinity 35  

Growth medium f/2-Si amended natural seawater  
Modifications to growth medium no silicate  

NCBI SRA SRS621519  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Envo term for habitat secondary term -select-  
Habitat marine habitat  

Latitude -39  
Longitude 176  
Site description North Island  
Country NEW ZEALAND  
Country NZ  
Other collection site info North Island  

Project id 104  
Collection start time 1983-01-01 00:00:00.0  
Collection stop time 1983-01-01 00:00:00.0  
Clonal Unknown  
Collection date 01-JAN-83  
Date of experiment 07-DEC-11  
External sample id CCMP768L  
Investigation type EU  
Principle investigator Alexandra Z. Worden  

GenBank BioSample 2740057  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP109/MMETSP1091.fastq.tar  

Day portion of day night cycle in hours 14  
Light 100  
Experimental temperature 21  
Night portion of day night cycle in hours 10  

Library acc CAM_LIB_001821  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000792  
Combined assembly name Rhodomonas-sp-CCMP768  
Pcr amp No  

Source mat id (MMETSP1091) Rhodomonas sp. - seawater  
Source mat id CAM_BM_003093  
Source mat id CAM_SMPL_003073  
Sample type eukaryotes  
Sample description Rhodomonas sp. CCMP768  
Sample name MMETSP1091  
Taxon id 302021  
Sample material seawater  

Strain CCMP768  
Genus Rhodomonas  
Species sp.  
Family Pyrenomonadaceae  
Order Pyrenomonadales  
Superkingdom Eukaryota  
Class Cryptophyceae  
Phylum Cryptophyta  

N/A