Sample: MMETSP1090


Sample Name MMETSP1090 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Isochrysis sp CCMP1244

Sample Accession CAM_SMPL_003072
Assembly  
Combined Assembly Isochrysis-sp-CCMP1244
Taxon ID 37098

Prey organism if applicable NA  

Ph 35  
Phosphate 50  
Nitrate 10  
Silicate 10  
Ammonium 882  
Axenic No  
Trace elements 12766  
Experimental salinity 35  

Longhurst province GFST  

Growth medium K amended artificial sea water  
Modifications to growth medium silicate omitted  
Other environmental metadata available none  

NCBI SRA SRS621513  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Envo term for habitat secondary term Other  
Habitat marine habitat  
Habitat description oceanic  

Site name North Atlantic  
Latitude 38.3048  
Longitude -69.6192  
Sample collection site North Atlantic  

Project id 104  
Collection start time 1981-06-01 00:00:00.0  
Collection stop time 1981-06-01 00:00:00.0  
Clonal Unknown  
Collection date 01-JUN-81  
Date of experiment 09-DEC-11  
External sample id CCMP1244L  
Investigation type EU  
Principle investigator Alexandra Z. Worden  

GenBank BioSample 2740052  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP109/MMETSP1090.fastq.tar  

Day portion of day night cycle in hours 30  
Light 8.2  
Experimental temperature 21  
Night portion of day night cycle in hours 14  

Library acc CAM_LIB_001820  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000791  
Combined assembly name Isochrysis-sp-CCMP1244  
Pcr amp No  

Source mat id (MMETSP1090) Isochrysis sp - seawater  
Source mat id 3503  
Source mat id CAM_BM_003092  
Source mat id CAM_SMPL_003072  
Sample type eukaryotes  
Sample description Isochrysis sp CCMP1244  
Sample name MMETSP1090  
Taxon id 37098  
Sample material seawater  

Strain CCMP1244  
Genus Isochrysis  
Species sp  
Family Isochrysidaceae  
Order Isochrysidales  
Superkingdom Eukaryota  
Class Prymnesiophyceae  
Phylum Haptophyta  

N/A