Sample: MMETSP1084


Sample Name MMETSP1084 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Micromonas sp. RCC472

Sample Accession CAM_SMPL_003071
Assembly  
Combined Assembly Micromonas-sp-RCC472
Taxon ID 38833

Prey organism if applicable n/a  

Ph 8.2  
Phosphate 36  
Nitrate 882  
Axenic No  
Trace elements 12795  
Experimental salinity 35  

Growth medium f/2-Si amended artificial seawater  
Modifications to growth medium no silicate  

NCBI SRA SRS621511  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Envo term for habitat secondary term -select-  
Habitat marine habitat  

Latitude 8.5  
Longitude -78.22  
Site description Gulf of Panama, Pacific  
Country PA  
Country PANAMA  
Other collection site info Gulf of Panama, Pacific  

Project id 104  
Collection start time 1997-03-01 00:00:00.0  
Collection stop time 1997-03-01 00:00:00.0  
Clonal Unknown  
Collection date 01-MAR-97  
Date of experiment 07-DEC-11  
External sample id RCC472L  
Investigation type EU  
Principle investigator Alexandra Z. Worden  

GenBank BioSample 2740138  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP108/MMETSP1084.fastq.tar  

Day portion of day night cycle in hours 14  
Light 100  
Experimental temperature 21  
Night portion of day night cycle in hours 10  

Library acc CAM_LIB_001819  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000790  
Combined assembly name Micromonas-sp-RCC472  
Pcr amp No  

Source mat id (MMETSP1084) Micromonas sp. - seawater  
Source mat id CAM_BM_003091  
Source mat id CAM_SMPL_003071  
Sample type eukaryotes  
Sample description Micromonas sp. RCC472  
Sample name MMETSP1084  
Taxon id 38833  
Sample material seawater  

Strain RCC472  
Genus Micromonas  
Species sp.  
Family Mamiellaceae  
Order Mamiellales  
Superkingdom Eukaryota  
Class Prasinophyceae  
Phylum Chlorophyta  

N/A