Sample: MMETSP1082


Sample Name MMETSP1082 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Micromonas sp. NEPCC29

Sample Accession CAM_SMPL_003070
Assembly  
Combined Assembly Micromonas-sp-NEPCC29
Taxon ID 38833

Prey organism if applicable n/a  

Ph 8.2  
Phosphate 36  
Nitrate 882  
Axenic No  
Trace elements 12795  
Experimental salinity 35  

Growth medium f/2-Si amended artificial seawater  
Modifications to growth medium no silicate  

NCBI SRA SRS621510  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Envo term for habitat secondary term -select-  
Habitat marine habitat  

Site name OTHER  
Latitude 49.25  
Longitude -123.1  
Site description Vancouver, Jericho Beach  
Country CA  
Country CANADA  
Sample collection site OTHER  
Other collection site info Vancouver, Jericho Beach  

Project id 104  
Clonal Unknown  
Date of experiment 07-DEC-11  
External sample id NEPCC29L  
Investigation type EU  
Principle investigator Alexandra Z. Worden  

GenBank BioSample 2740549  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP108/MMETSP1082.fastq.tar  

Day portion of day night cycle in hours 14  
Light 100  
Experimental temperature 21  
Night portion of day night cycle in hours 10  

Library acc CAM_LIB_001818  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000789  
Combined assembly name Micromonas-sp-NEPCC29  
Pcr amp No  

Source mat id (MMETSP1082) Micromonas sp. - seawater  
Source mat id CAM_BM_003090  
Source mat id CAM_SMPL_003070  
Sample type eukaryotes  
Sample description Micromonas sp. NEPCC29  
Sample name MMETSP1082  
Taxon id 38833  
Sample material seawater  

Strain NEPCC29  
Genus Micromonas  
Species sp.  
Family Mamiellaceae  
Order Mamiellales  
Superkingdom Eukaryota  
Class Prasinophyceae  
Phylum Chlorophyta  

N/A