Sample: MMETSP1140


Sample Name MMETSP1140 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Pavlova sp. CCMP459

Sample Accession CAM_SMPL_002895
Assembly  
Combined Assembly Pavlova-sp-CCMP459
Taxon ID 298111

Ph 8.1  
Phosphate 36.2  
Nitrate 882  
Axenic 1  
Trace elements 12794  
Experimental salinity 34  

Growth medium f/2 amended seawater  
Modifications to growth medium f/2 nutrients, no silica  

NCBI SRA SRS621363  

Project id 104  
Clonal 1  
Date of experiment 01-DEC-11  
External sample id CCMP 459 +Uv 12h  
Investigation type EU  
Principle investigator Sheri Floge  
Other experimental metadata available Sample following 2min of UV-C (254nm) irradiation preceding cell population decline at approximately 12hours post-irradiation.  

GenBank BioSample 2740568  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP114/MMETSP1140.fastq.tar  

Day portion of day night cycle in hours 16  
Light 200  
Experimental temperature 16  
Night portion of day night cycle in hours 8  

Library acc CAM_LIB_001661  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000713  
Combined assembly name Pavlova-sp-CCMP459  
Pcr amp No  

Source mat id (MMETSP1140) Pavlova sp.  
Source mat id CAM_BM_002915  
Source mat id CAM_SMPL_002895  
Sample type eukaryotes  
Sample description Pavlova sp. CCMP459  
Sample name MMETSP1140  
Taxon id 298111  

Strain CCMP459  
Genus Pavlova  
Species sp.  
Family Pavlovaceae  
Order Pavlovales  
Superkingdom Eukaryota  
Class Pavlovophyceae  
Phylum Haptophyta  

N/A