Sample: MMETSP0812


Sample Name MMETSP0812 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Dinobryon sp. UTEXLB2267

Sample Accession CAM_SMPL_002850
Assembly  
Combined Assembly Dinobryon-sp-UTEXLB2267
Taxon ID 98059

Ph 8  
Axenic No  

Growth medium DVV freshwater  
Modifications to growth medium 1:100 dilution of organic phosphorous added  

NCBI SRA SRS616844  

Habitat name marine habitat  
Habitat marine habitat  

Site name Sippewissett Pond, Woods Hole, Massachussetts  
Latitude 41.57595  
Longitude -70.64038  
Country UNITED STATES  
Country US  
Sample collection site Sippewissett Pond, Woods Hole, Massachussetts  

Project id 104  
Collection start time 1973-08-01 00:00:00.0  
Collection stop time 1973-08-01 00:00:00.0  
Clonal Unknown  
Collection date 01-AUG-73  
Date of experiment 31-JAN-11  
External sample id DinoPlim  
Investigation type EU  
Principle investigator David Caron  
Primary citation http://web.biosci.utexas.edu/utex/algaeDetail.aspx?algaeID=4730  
Other experimental metadata available Chlorophyll - 65.5 ug/L  

GenBank BioSample 2740034  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP081/MMETSP0812.fastq.tar  

Day portion of day night cycle in hours 12  
Light 150  
Experimental temperature 18  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001616  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000668  
Combined assembly name Dinobryon-sp-UTEXLB2267  
Pcr amp No  

Source mat id (MMETSP0812) Dinobryon sp.  
Source mat id CAM_BM_002870  
Source mat id CAM_SMPL_002850  
Sample type eukaryotes  
Sample description Dinobryon sp. UTEXLB2267  
Sample name MMETSP0812  
Taxon id 98059  

Strain UTEXLB2267  
Genus Dinobryon  
Species sp.  
Family Dinobryaceae  
Order Chromulinales  
Superkingdom Eukaryota  
Class Synurophyceae  
Phylum Ochrophyta  

N/A