Sample: MMETSP0880


Sample Name MMETSP0880 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Thalassiosira weissflogii CCMP1336

Sample Accession CAM_SMPL_002832
Assembly  
Combined Assembly Thalassiosira-weissflogii-CCMP1336
Taxon ID 67004

Ph 7.8  
Phosphate 10  
Nitrate 100  
Silicate 100  
Iron 20  
Axenic No  
Trace elements 350  
Experimental salinity 35  
Carbon dioxide 750  

Growth medium Aquil nutrients amended seawater  
Modifications to growth medium Total Fe concentration was 20 nM  

NCBI SRA SRS619048  

Project id 104  
Clonal 1  
Date of experiment 11-JUN-11  
Investigation type EU  
Principle investigator Francois Morel  

GenBank BioSample 2740526  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP088/MMETSP0880.fastq.tar  

Pressure 1  
Day portion of day night cycle in hours 24  
Light 120  
Experimental temperature 20  

Library acc CAM_LIB_001598  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000650  
Combined assembly name Thalassiosira-weissflogii-CCMP1336  
Pcr amp No  

Source mat id (MMETSP0880) Thalassiosira weissflogii  
Source mat id CAM_BM_002852  
Source mat id CAM_SMPL_002832  
Sample type eukaryotes  
Sample description Thalassiosira weissflogii CCMP1336  
Sample name MMETSP0880  
Taxon id 67004  

Strain CCMP1336  
Genus Thalassiosira  
Species weissflogii  
Family Skeletonemaceae  
Superkingdom Eukaryota  
Class Coscinodiscophyceae  
Phylum Bacillariophyta