Sample: MMETSP0471


Sample Name MMETSP0471 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Oxyrrhis marina

Sample Accession CAM_SMPL_002784
Assembly  
Combined Assembly Oxyrrhis-marina
Taxon ID 2969

Prey organism if applicable Isochrysis galbana CCMP1323  

Axenic No  
Experimental salinity 29.4  

Growth medium seawater  
Modifications to growth medium 0.2um filtered, autoclaved  
Other environmental metadata available probably orginiated from Hans Henrick Jacobsen, Denmark; SMPC 107  

NCBI SRA SRS619023  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Habitat marine habitat  

Project id 104  
Clonal No  
Date of experiment 30-JAN-12  
External sample id Oxy Starved  
Investigation type EU  
Principle investigator Susanne Menden-Deuer  
Primary citation doi:10.1093/plankt/fbq121  
Other experimental metadata available not axenic; harvested 1 week post feeding - starved  

GenBank BioSample 2740484  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP047/MMETSP0471.fastq.tar  

Day portion of day night cycle in hours 12  
Light 8  
Experimental temperature 15  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001550  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000602  
Combined assembly name Oxyrrhis-marina  
Pcr amp No  

Source mat id (MMETSP0471) Oxyrrhis marina  
Source mat id CAM_BM_002804  
Source mat id CAM_SMPL_002784  
Sample type eukaryotes  
Sample description Oxyrrhis marina  
Sample name MMETSP0471  
Taxon id 2969  

Strain Oxyrrhis marina  
Genus Oxyrrhis  
Species marina  
Family Oxyrrhinaceae  
Order Oxyrrhinales  
Superkingdom Eukaryota  
Class Dinophyceae  
Phylum Dinophyta  

N/A