Sample: MMETSP0753


Sample Name MMETSP0753 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Chaetoceros neogracile CCMP1317

Sample Accession CAM_SMPL_002761
Assembly  
Combined Assembly Chaetoceros-neogracile-CCMP1317
Taxon ID 240364

Ph 8  
Phosphate 0.01  
Silicate .11  
Axenic No  
Trace elements 16.33  
Experimental salinity 30  

Growth medium NEPC  
Modifications to growth medium NEPC for all nutrients except nitrate, which was not added  

NCBI SRA SRS618951  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Habitat marine habitat  

Project id 104  
Clonal 1  
Date of experiment 01-DEC-11  
External sample id C.neogracile_N-limited  
Investigation type EU  
Principle investigator Sarah Smith  
Other experimental metadata available growth, neutral lipid content (fluorometrically determined with Nile Red or Bodipy)  

GenBank BioSample 2740510  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP075/MMETSP0753.fastq.tar  

Day portion of day night cycle in hours 24  
Light 200  
Experimental temperature 20  

Library acc CAM_LIB_001527  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000579  
Combined assembly name Chaetoceros-neogracile-CCMP1317  
Pcr amp No  

Source mat id (MMETSP0753) Chaetoceros neogracile  
Source mat id CAM_BM_002781  
Source mat id CAM_SMPL_002761  
Sample type eukaryotes  
Sample description Chaetoceros neogracile CCMP1317  
Sample name MMETSP0753  
Taxon id 240364  

Strain CCMP1317  
Genus Chaetoceros  
Species neogracile  
Family Chaetocerotaceae  
Order Chaetocerotales  
Superkingdom Eukaryota  
Class Coscinodiscophyceae  
Phylum Bacillariophyta  

N/A