Sample: MMETSP0915


Sample Name MMETSP0915 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Aureococcus anophagefferens CCMP1850

Sample Accession CAM_SMPL_002751
Assembly  
Combined Assembly Aureococcus-anophagefferens-CCMP1850
Taxon ID 44056

Chlorophyll 14  
Prey organism if applicable none  

Ph 7.8  
Dissolved oxygen 9.9  
Phosphate 5  
Nitrate 0.35  
Silicate 1  
Particulate organic carbon 1.23  
Ammonium 30  
Iron 1100  
Axenic 1  
Trace elements 1004  
Experimental salinity 32  
Environmental salinity 25.25  
Carbon dioxide 400  

Longhurst province NWCS  

Growth medium GSe media  
Modifications to growth medium Ammonium in place of nitrate  

NCBI SRA SRS621373  

Habitat name marine habitat  
Envo term for habitat primary term Aquatic: marine  
Envo term for habitat secondary term Not Applicable  
Habitat marine habitat  
Habitat description Estuarine  

Site name OTHER  
Latitude 40.6508  
Longitude -73.1524  
Site description Great South Bay, NY, Suffolk County monitoring station #300  
Country UNITED STATES  
Country US  
Depth 1  
Sample collection site OTHER  
Other collection site info Great South Bay, NY, Suffolk County monitoring station #300  

Project id 104  
Collection start time 2098-05-06 12:00:00.0  
Collection stop time 2098-05-06 12:00:00.0  
Clonal 1  
Collection date 06-MAY-98  
Date of experiment 20-NOV-11  
External sample id Aureococcus replete  
Investigation type EU  
Principle investigator Christopher Gobler  
Additional citations Gobler, C.J., Lonsdale, D.J., Boyer, G.L. 2005. A synthesis and review of causes and impact of harmful brown tide blooms caused by the alga, Aureococcus anophagefferens. Estuaries 28: 726-749  
Primary citation Sieburth, J.M., Johnson, P.W. & Hargraves, P.E. (1988). Ultrastructure and ecology of Aureococcus anophagefferens gen et sp. nov. (Chrysophyceae): the dominant picoplankter during a bloom in Narragansett Bay, Rhode Island, summer 1985. Journal of Phycolo  
Primary citation Sieburth, J.M., Johnson, P.W. & Hargraves, P.E. (1988). Ultrastructure and ecology of Aureococcus anophagefferens gen et sp. nov. (Chrysophyceae): the dominant picoplankter during a bloom in Narragansett Bay, Rhode Island, summer 1985. Journal of Phycolog  
Collection time 12:00 PM  

GenBank BioSample 2740149  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP091/MMETSP0915.fastq.tar  

Pressure 1  
Day portion of day night cycle in hours 12  
Light 100  
Experimental temperature 22  
Night portion of day night cycle in hours 12  
Environmental temperature 18  

Library acc CAM_LIB_001517  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000569  
Combined assembly name Aureococcus-anophagefferens-CCMP1850  
Pcr amp No  

Source mat id (MMETSP0915) Aureococcus anophagefferens - seawater  
Source mat id 3226  
Source mat id CAM_BM_002771  
Source mat id CAM_SMPL_002751  
Sample type eukaryotes  
Sample description Aureococcus anophagefferens CCMP1850  
Sample name MMETSP0915  
Taxon id 44056  
Sample material seawater  

Strain CCMP1850  
Genus Aureococcus  
Species anophagefferens  
Family Pelagomonodaceae  
Superkingdom Eukaryota  
Class Pelagophyceae  
Phylum Ochrophyta