Sample: MMETSP0740


Sample Name MMETSP0740 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Thalassiosira miniscula CCMP1093

Sample Accession CAM_SMPL_002738
Assembly  
Combined Assembly Thalassiosira-miniscula-CCMP1093
Taxon ID 385413

Ph 8  
Phosphate 0.01  
Nitrate 0.55  
Silicate .11  
Axenic No  
Trace elements 16.33  
Experimental salinity 30  

Growth medium NEPC  
Modifications to growth medium NEPC for all nutrients + 2.5mg L-1 of the microtubule inhibitor nocodazole  

NCBI SRA SRS619071  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Habitat marine habitat  

Project id 104  
Clonal 1  
Date of experiment 01-JUN-12  
External sample id T.miniscula_Nocodazole  
Investigation type EU  
Principle investigator Sarah Smith  

GenBank BioSample 2740503  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP074/MMETSP0740.fastq.tar  

Day portion of day night cycle in hours 24  
Light 200  
Experimental temperature 20  

Library acc CAM_LIB_001504  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000556  
Combined assembly name Thalassiosira-miniscula-CCMP1093  
Pcr amp No  

Source mat id (MMETSP0740) Thalassiosira miniscula  
Source mat id CAM_BM_002758  
Source mat id CAM_SMPL_002738  
Sample type eukaryotes  
Sample description Thalassiosira miniscula CCMP1093  
Sample name MMETSP0740  
Taxon id 385413  

Strain CCMP1093  
Genus Thalassiosira  
Species miniscula  
Family Skeletonemaceae  
Superkingdom Eukaryota  
Class Coscinodiscophyceae  
Phylum Bacillariophyta  

N/A