Sample: MMETSP0738


Sample Name MMETSP0738 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Thalassiosira miniscula CCMP1093

Sample Accession CAM_SMPL_002728
Assembly  
Combined Assembly Thalassiosira-miniscula-CCMP1093
Taxon ID 385413

Ph 8  
Phosphate 0.01  
Nitrate 0.55  
Axenic No  
Trace elements 16.33  
Experimental salinity 30  

Growth medium NEPC  
Modifications to growth medium NEPC for all nutrients except silicate, which was not added  

NCBI SRA SRS619070  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Habitat marine habitat  

Project id 104  
Clonal 1  
Date of experiment 01-JUN-12  
External sample id T.miniscula_Si-limited  
Investigation type EU  
Principle investigator Sarah Smith  

GenBank BioSample 2740501  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP073/MMETSP0738.fastq.tar  

Day portion of day night cycle in hours 24  
Light 200  
Experimental temperature 20  

Library acc CAM_LIB_001494  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000546  
Combined assembly name Thalassiosira-miniscula-CCMP1093  
Pcr amp No  

Source mat id (MMETSP0738) Thalassiosira miniscula  
Source mat id CAM_BM_002748  
Source mat id CAM_SMPL_002728  
Sample type eukaryotes  
Sample description Thalassiosira miniscula CCMP1093  
Sample name MMETSP0738  
Taxon id 385413  

Strain CCMP1093  
Genus Thalassiosira  
Species miniscula  
Family Skeletonemaceae  
Superkingdom Eukaryota  
Class Coscinodiscophyceae  
Phylum Bacillariophyta  

N/A