Sample: MMETSP0734


Sample Name MMETSP0734 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Fragilariopsis kerguelensis L26-C5

Sample Accession CAM_SMPL_002718
Assembly  
Combined Assembly Fragilariopsis-kerguelensis-L26_C5
Taxon ID 186038

Ph 8.1  
Phosphate 10  
Nitrate 300  
Silicate 200  
Iron 1370  
Axenic No  
Trace elements 1750  
Experimental salinity 32  

Longhurst province SANT  

Growth medium Aquil  
Modifications to growth medium Standard Aquil with 100 uM EDTA  

NCBI SRA SRS619026  

Habitat name marine habitat  
Habitat marine habitat  
Habitat description polar open ocean mixed layer  

Latitude -48  
Longitude -16  
Site description L26-C5 is an offspring of mating experiments during the Lohafex Iron Enrichment Experiment  
Other collection site info L26-C5 is an offspring of mating experiments during the Lohafex Iron Enrichment Experiment  

Project id 104  
Clonal 1  
Date of experiment 01-NOV-11  
External sample id F.kerg_Fe_SL  
Investigation type EU  
Principle investigator Adrian Marchetti  
Primary citation Hasle, G.R. (1965). Nitzschia and Fragilariopsis species studied in the light and electron microscopes. III. The genus Fragilariopsis. Skrifter Utgitt av Det Norske Videnskaps-Akademi i Oslo I. Mat.-Naturv. Klasse Ny Serie, 21:1-49.  
Other experimental metadata available Growth rate = 0.23 d-1  

GenBank BioSample 2740497  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP073/MMETSP0734.fastq.tar  

Day portion of day night cycle in hours 24  
Light 90  
Experimental temperature 4  

Library acc CAM_LIB_001484  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000536  
Combined assembly name Fragilariopsis-kerguelensis-L26_C5  
Pcr amp No  

Source mat id (MMETSP0734) Fragilariopsis kerguelensis - seawater  
Source mat id CAM_BM_002738  
Source mat id CAM_SMPL_002718  
Sample type eukaryotes  
Sample description Fragilariopsis kerguelensis L26-C5  
Sample name MMETSP0734  
Taxon id 186038  
Sample material seawater  

Strain L26-C5  
Genus Fragilariopsis  
Species kerguelensis  
Family Bacillariaceae  
Superkingdom Eukaryota  
Class Bacillariophyceae  
Phylum Bacillariophyta