Sample: MMETSP1016


Sample Name MMETSP1016 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Karlodinium micrum CCMP2283

Sample Accession CAM_SMPL_002693
Assembly  
Combined Assembly Karlodinium-micrum-CCMP2283
Taxon ID 342587

Prey organism if applicable none  

Ph 8.2  
Phosphate 60  
Nitrate 0.04  
Axenic No  
Trace elements 1170  
Experimental salinity 20  

Growth medium L1  
Modifications to growth medium none  
Other environmental metadata available Isolate from tidally influenced retention pond, Marshide Properties, Hilton Head, South Carolina USA  

NCBI SRA SRS621417  

Habitat name marine habitat  
Habitat marine habitat  
Habitat description coastal  

Latitude 32.2167  
Longitude -80.7  
Longitude 80.7355  

Project id 104  
Clonal Unknown  
Date of experiment 01-JUL-07  
External sample id K.micrum L1 - N  
Investigation type EU  
Principle investigator Geoff Sinclair, Boris Wawrik  

GenBank BioSample 2740533  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP101/MMETSP1016.fastq.tar  

Day portion of day night cycle in hours 12  
Light 60  
Experimental temperature 22  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001459  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000511  
Combined assembly name Karlodinium-micrum-CCMP2283  
Pcr amp No  

Source mat id (MMETSP1016) Karlodinium micrum  
Source mat id CAM_BM_002713  
Source mat id CAM_SMPL_002693  
Sample type eukaryotes  
Sample description Karlodinium micrum CCMP2283  
Sample name MMETSP1016  
Taxon id 342587  

Strain CCMP2283  
Genus Karlodinium  
Species micrum  
Family Gymnodiniaceae  
Order Gymnodiniales  
Superkingdom Eukaryota  
Class Dinophyceae  
Phylum Dinophyta