Sample: MMETSP1131


Sample Name MMETSP1131 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Isochrysis sp. CCMP1324

Sample Accession CAM_SMPL_002652
Assembly  
Combined Assembly Isochrysis-sp-CCMP1324
Taxon ID 40639

Ph 8.1  
Phosphate 36.2  
Nitrate 882  
Axenic 1  
Trace elements 12794  
Experimental salinity 34  

Growth medium f/2 amended seawater  
Modifications to growth medium f/2 nutrients, no silica  

NCBI SRA SRS621467  

Project id 104  
Clonal 1  
Date of experiment 01-DEC-11  
External sample id CCMP 1324 +UV 24h  
Investigation type EU  
Principle investigator Sheri Floge  
Other experimental metadata available Sample following 2min of UV-C (254nm) irradiation mid-way through cell population decline at approximately 24hours post-irradiation.  

GenBank BioSample 2740562  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP113/MMETSP1131.fastq.tar  

Day portion of day night cycle in hours 16  
Light 200  
Experimental temperature 16  
Night portion of day night cycle in hours 8  

Library acc CAM_LIB_001418  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000470  
Combined assembly name Isochrysis-sp-CCMP1324  
Pcr amp No  

Source mat id (MMETSP1131) Isochrysis sp.  
Source mat id CAM_BM_002672  
Source mat id CAM_SMPL_002652  
Sample type eukaryotes  
Sample description Isochrysis sp. CCMP1324  
Sample name MMETSP1131  
Taxon id 40639  

Strain CCMP1324  
Genus Isochrysis  
Species sp.  
Family Isochrysidaceae  
Order Isochrysidales  
Superkingdom Eukaryota  
Class Prymnesiophyceae  
Phylum Haptophyta  

N/A