Sample: MMETSP1123


Sample Name MMETSP1123 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Symbiodinium sp. Mp

Sample Accession CAM_SMPL_002631
Assembly  
Combined Assembly Symbiodinium-sp-Mp
Taxon ID 230996

Ph 8.1  
Phosphate 36.2  
Nitrate 882  
Axenic No  
Trace elements 12794  
Experimental salinity 34  

Growth medium f/2 amended seawater  
Modifications to growth medium f/2 for all nutrients, no Na2SiO3 added  

NCBI SRA SRS621434  

Habitat name marine habitat  
Habitat marine habitat  

Site name Pacific_Ocean  
Country PALAU  
Country PW  
Sample collection site Pacific_Ocean  

Project id 104  
Clonal No  
Date of experiment 01-OCT-11  
External sample id Mp +UV pre-crash  
Investigation type EU  
Principle investigator William Wilson  
Other experimental metadata available 1 L of culture will be exposed to UV light (254 nm) for 2 minutes, then returned to normal growth conditions. RNA will be harvested immediately preceding UV-induced population crash  

GenBank BioSample 2740554  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP112/MMETSP1123.fastq.tar  

Day portion of day night cycle in hours 12  
Light 200  
Experimental temperature 25  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001397  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000449  
Combined assembly name Symbiodinium-sp-Mp  
Pcr amp No  

Source mat id (MMETSP1123) Symbiodinium sp.  
Source mat id CAM_BM_002651  
Source mat id CAM_SMPL_002631  
Sample type eukaryotes  
Sample description Symbiodinium sp. Mp  
Sample name MMETSP1123  
Taxon id 230996  

Strain Mp  
Genus Symbiodinium  
Species sp.  
Family Symbiodiniaceae  
Order Suessiales  
Superkingdom Eukaryota  
Class Dinophyceae  
Phylum Dinophyta