Sample: MMETSP0451_2C


Sample Name MMETSP0451_2C 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Oxyrrhis marina CCMP1795 (combined sample which includes MMETSP0451_2 and MMETSP0452_2)

Sample Accession CAM_SMPL_002564
Assembly  
Combined Assembly Oxyrrhis-marina-CCMP1795
Taxon ID 2969

Prey organism if applicable Dunaliella tertiolecta (CCMP1320) and Synechococcus sp. (CCMP2515)  

Ph 8.1  
Phosphate 0.72  
Nitrate 17.6  
Axenic Unknown  
Trace elements 0.234  
Experimental salinity 28  

Growth medium f/100 amended seawater  

NCBI SRA SRS621302  

Country UNITED STATES  
Country US  

Project id 104  
Clonal Unknown  
Date of experiment 15-APR-11  
External sample id OxymaSL1  
Investigation type EU  
Principle investigator Senjie Lin  
Primary citation Slamovits,C.H. and Keeling,P.J. 2010. Contributions of Oxyrrhis marina to molecular biology, genomics and organelle evolution of dinoflagellates. J. Plankton Res. doi: 10.1093/plankt/fbq153  
Other experimental metadata available submitted is spliced leader-based cDNA  

GenBank BioSample 2740478  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP045/MMETSP0451.fastq.tar  

Day portion of day night cycle in hours 12  
Light 100  
Experimental temperature 20  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001330  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000382  
Combined assembly name Oxyrrhis-marina-CCMP1795  
Pcr amp 1  

Source mat id (MMETSP0451) Oxyrrhis marina  
Source mat id CAM_BM_002584  
Source mat id CAM_SMPL_002564  
Sample type eukaryotes  
Sample description Oxyrrhis marina CCMP1795 (combined sample which includes MMETSP0451_2 and MMETSP0452_2)  
Sample name MMETSP0451_2C  
Taxon id 2969  

Strain CCMP1795  
Genus Oxyrrhis  
Species marina  
Family Oxyrrhinaceae  
Order Oxyrrhinales  
Superkingdom Eukaryota  
Class Dinophyceae  
Phylum Dinophyta  

N/A