Sample: MMETSP0361


Sample Name MMETSP0361 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Scrippsiella Hangoei SHTV-5

Sample Accession CAM_SMPL_002525
Assembly  
Combined Assembly Scrippsiella-hangoei-SHTV5
Taxon ID 268821

Ph 7  
Phosphate 36  
Nitrate 883  
Silicate 100  
Axenic No  
Trace elements 20920  
Experimental salinity 30  
Environmental salinity 6.5  

Longhurst province NECS  

Growth medium f/2 amended sea water without silica  

NCBI SRA SRS616852  

Habitat name sediment  
Habitat sediment  
Habitat description eutrophic coastal waters  

Site name Baltic Sea  
Latitude 59.51  
Longitude 23.13  
Country FI  
Country FINLAND  
Depth 40  
Sample collection site Baltic Sea  

Project id 104  
Collection start time 2008-07-01 00:00:00.0  
Collection stop time 2008-07-01 00:00:00.0  
Clonal 1  
Collection date 01-JUL-08  
Date of experiment 15-JUN-11  
Investigation type EU  
Principle investigator Karin Rengefors  
Primary citation Larsen, J., Kuosa, H., Ikävalko, J., Kivi, K. & Hällfors, S. 1995. A redescription of Scrippsiella hangoei (Schiller) comb. nov. — a ‘red tide’ forming dinoflagellate from the northern Baltic. Phycologia 34(2):135–144  

GenBank BioSample 2740276  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP036/MMETSP0361.fastq.tar  

Day portion of day night cycle in hours 12  
Light 20  
Experimental temperature 3  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001291  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000343  
Combined assembly name Scrippsiella-hangoei-SHTV5  
Pcr amp No  

Source mat id (MMETSP0361) Scrippsiella Hangoei - Sediment  
Source mat id 3000  
Source mat id CAM_BM_002545  
Source mat id CAM_SMPL_002525  
Sample type eukaryotes  
Sample description Scrippsiella Hangoei SHTV-5  
Sample name MMETSP0361  
Taxon id 268821  
Sample material Sediment  

Strain SHTV-5  
Genus Scrippsiella  
Species Hangoei  
Family Peridiniaceae  
Order Peridiniales  
Superkingdom Eukaryota  
Class Dinophyceae  
Phylum Dinophyta  

N/A