Sample: MMETSP0347


Sample Name MMETSP0347 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Alexandrium fundyense CCMP1719

Sample Accession CAM_SMPL_002519
Assembly  
Combined Assembly Alexandrium-fundyense-CCMP1719
Taxon ID 2932

Ph 8  
Phosphate 36.2  
Nitrate 882  
Silicate 106  
Axenic No  
Trace elements 24571.2  
Experimental salinity 25  

Growth medium L1  
Modifications to growth medium no modifications  

NCBI SRA SRS621310  

Habitat name marine habitat  
Habitat marine habitat  

Site name Atlantic Ocean  
Latitude 43.1  
Longitude -70.782  
Longitude 70.782  
Site description Portsmouth, New Hampshire  
Country UNITED STATES  
Country US  
Sample collection site Atlantic Ocean  
Other collection site info Portsmouth, New Hampshire  

Project id 104  
Collection start time 1985-11-01 00:00:00.0  
Collection stop time 1985-11-01 00:00:00.0  
Clonal 1  
Collection date 01-NOV-85  
Date of experiment 03-JUN-11  
Investigation type EU  
Principle investigator Kjetill Sigurd Jakobsen  
Additional citations PMID: 21625593;14583546; Brosnahan et al (2010) Deep-Sea Research II 57 (2010) 175–189;  
Primary citation ; original strain synonym is GTCA28  

GenBank BioSample 2740063  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP034/MMETSP0347.fastq.tar  

Day portion of day night cycle in hours 12  
Light 100  
Experimental temperature 16  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001285  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000337  
Combined assembly name Alexandrium-fundyense-CCMP1719  
Pcr amp 1  

Source mat id (MMETSP0347) Alexandrium fundyense  
Source mat id CAM_BM_002539  
Source mat id CAM_SMPL_002519  
Sample type eukaryotes  
Sample description Alexandrium fundyense CCMP1719  
Sample name MMETSP0347  
Taxon id 2932  

Strain CCMP1719  
Genus Alexandrium  
Species fundyense  
Family Goniodomataceae  
Order Gonyaulacales  
Superkingdom Eukaryota  
Class Dinophyceae  
Phylum Dinophyta  

N/A