Sample: MMETSP0316


Sample Name MMETSP0316 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Amphora coffeaeformis CCMP127

Sample Accession CAM_SMPL_002502
Assembly  
Combined Assembly Amphora-coffeaeformis-CCMP127
Taxon ID 265554

Ph 8  
Phosphate 36  
Nitrate 1000  
Silicate 106  
Axenic 1  
Trace elements 1000  
Experimental salinity 35  

Growth medium f/2 + silicate  
Modifications to growth medium f/2 + silicate, adjusted to 1 mM nitrate and amended with 200 µM acetate  

NCBI SRA SRS618829  

Project id 104  
Clonal Unknown  
Date of experiment 15-APR-11  
External sample id Ac-O+N  
Investigation type EU  
Principle investigator Peter Stief  
Primary citation Agardh C.A. 1827. Aufzählung einiger in der österreichischen Ländern gefundenen neuen Gattungen und Arten von Algen, nebst ihrer Diagnostik und beigefügten Bemerkungen. Flora 10: 625-640.  

GenBank BioSample 2740461  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP031/MMETSP0316.fastq.tar  

Experimental temperature 15  
Night portion of day night cycle in hours 24  

Library acc CAM_LIB_001268  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000320  
Combined assembly name Amphora-coffeaeformis-CCMP127  
Pcr amp No  

Source mat id (MMETSP0316) Amphora coffeaeformis  
Source mat id CAM_BM_002522  
Source mat id CAM_SMPL_002502  
Sample type eukaryotes  
Sample description Amphora coffeaeformis CCMP127  
Sample name MMETSP0316  
Taxon id 265554  

Strain CCMP127  
Genus Amphora  
Species coffeaeformis  
Family Catenulaceae  
Order Thalassiophysales  
Superkingdom Eukaryota  
Class Bacillariophyceae  
Phylum Bacillariophyta