Sample: MMETSP0171


Sample Name MMETSP0171 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Corethron pennatum L29A3

Sample Accession CAM_SMPL_002449
Assembly  
Combined Assembly Corethron-pennatum-L29A3
Taxon ID 218684

Ph 8.15  
Phosphate 28.45  
Nitrate 28  
Silicate 60  
Ammonium 0.09  
Axenic No  
Trace elements 7.3  
Experimental salinity 33.6  

Longhurst province SANT  

Growth medium modified f/2 amended seawater  
Modifications to growth medium Using trace metal solution after Morel et al. 1979. medium set up using trace metal clean conditions and procedures.  
Other environmental metadata available further metadata available at http://www.pangaea.de  

NCBI SRA SRS619041  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Habitat marine habitat  

Site name Southern_Ocean  
Latitude -47.33333  
Longitude -15.65  
Site description LOHAFEX station 160  
Sample collection site Southern_Ocean  
Other collection site info LOHAFEX station 160  

Project id 104  
Collection start time 2009-01-18 00:00:00.0  
Collection stop time 2009-01-18 00:00:00.0  
Clonal 1  
Collection date 18-JAN-09  
Date of experiment 24-JUN-11  
External sample id C. pennatum Fe- 1  
Investigation type EU  
Principle investigator Bank Beszteri  
Primary citation (Grunow) Ostenfeld in Van Heurck 1909: 30, pl. 6: fig. 88  

GenBank BioSample 2740289  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP017/MMETSP0171.fastq.tar  

Day portion of day night cycle in hours 16  
Light 35  
Experimental temperature 3  
Night portion of day night cycle in hours 8  

Library acc CAM_LIB_001215  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000267  
Combined assembly name Corethron-pennatum-L29A3  
Pcr amp No  

Source mat id (MMETSP0171) Corethron pennatum - seawater  
Source mat id CAM_BM_002469  
Source mat id CAM_SMPL_002449  
Sample type eukaryotes  
Sample description Corethron pennatum L29A3  
Sample name MMETSP0171  
Taxon id 218684  
Sample material seawater  

Strain L29A3  
Genus Corethron  
Species pennatum  
Family Corethraceae  
Order Corethrales  
Superkingdom Eukaryota  
Class Coscinodiscophyceae  
Phylum Bacillariophyta  

N/A