Sample: MMETSP0150


Sample Name MMETSP0150 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Chaetoceros debilis MM31A-1

Sample Accession CAM_SMPL_002438
Assembly  
Combined Assembly Chaetoceros-debilis-MM31A_1
Taxon ID 122233

Ph 8.15  
Phosphate 28.45  
Nitrate 28  
Silicate 60  
Ammonium 0.09  
Axenic No  
Trace elements 7.3  
Experimental salinity 33.6  

Longhurst province SANT  

Growth medium modified f/2 amended seawater  
Modifications to growth medium Using trace metal solution after Morel et al. 1979. medium set up using trace metal clean conditions and procedures.  
Other environmental metadata available http://www.pangaea.de/search?q=eifex  

NCBI SRA SRS619035  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Envo term for habitat secondary term Other  
Habitat marine habitat  

Site name Southern_Ocean  
Latitude -49.6  
Longitude 2.1  
Site description EIFEX station 513  
Sample collection site Southern_Ocean  
Other collection site info EIFEX station 513  

Project id 104  
Collection start time 2004-02-27 00:00:00.0  
Collection stop time 2004-02-27 00:00:00.0  
Clonal 1  
Collection date 27-FEB-04  
Date of experiment 17-MAY-11  
External sample id C. debilis Fe- 2  
Investigation type EU  
Principle investigator Bank Beszteri  
Primary citation Cleve PT (1894). Bih. Kongl. Svenska Vetensk.-Akad. Handl. 20(3/2):1-16  

GenBank BioSample 2740224  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP015/MMETSP0150.fastq.tar  

Day portion of day night cycle in hours 16  
Light 35  
Experimental temperature 3  
Night portion of day night cycle in hours 8  

Library acc CAM_LIB_001204  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000256  
Combined assembly name Chaetoceros-debilis-MM31A_1  
Pcr amp No  

Source mat id (MMETSP0150) Chaetoceros debilis - seawater  
Source mat id 2913  
Source mat id CAM_BM_002458  
Source mat id CAM_SMPL_002438  
Sample type eukaryotes  
Sample description Chaetoceros debilis MM31A-1  
Sample name MMETSP0150  
Taxon id 122233  
Sample material seawater  

Strain MM31A-1  
Genus Chaetoceros  
Species debilis  
Family Chaetocerotaceae  
Order Chaetocerotales  
Superkingdom Eukaryota  
Class Coscinodiscophyceae  
Phylum Bacillariophyta  

N/A