Sample: MMETSP0112


Sample Name MMETSP0112 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Lotharella globosa CCCM811

Sample Accession CAM_SMPL_002406
Assembly  
Combined Assembly Lotharella-globosa-CCCM811
Taxon ID 91324

Ph 8  
Phosphate 29  
Nitrate 1410  
Axenic No  
Experimental salinity 35  

Growth medium ESM medium  

NCBI SRA SRS619065  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Envo term for habitat secondary term Other  
Habitat marine habitat  

Site name OTHER  
Latitude 13.4  
Longitude 144.7  
Site description coral reef of Anae Island  
Country GU  
Country GUAM  
Sample collection site OTHER  
Other collection site info coral reef of Anae Island  

Project id 104  
Collection start time 1990-02-12 00:00:00.0  
Collection stop time 1990-02-12 00:00:00.0  
Clonal 1  
Collection date 12-FEB-90  
Date of experiment 09-MAY-11  
External sample id L. globosa flagellate  
Investigation type EU  
Principle investigator Patrick Keeling  
Additional citations DOI: 10.1111/j.1440-1835.1996.tb00036.x  
Primary citation Ishida K. and Hara Y. (1994) Taxonomic studies on the Chlorarachniophyta I. Chlorarachnion globosum sp. nov. Phycologia 33(5):351-358.  
Other experimental metadata available flagellate cells  

GenBank BioSample 2740088  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP011/MMETSP0112.fastq.tar  

Day portion of day night cycle in hours 12  
Light 55  
Experimental temperature 20  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001172  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000224  
Combined assembly name Lotharella-globosa-CCCM811  
Pcr amp No  

Source mat id (MMETSP0112) Lotharella globosa - Seawater containing a marine chrysophyte  
Source mat id CAM_BM_002426  
Source mat id CAM_SMPL_002406  
Sample type eukaryotes  
Sample description Lotharella globosa CCCM811  
Sample name MMETSP0112  
Taxon id 91324  
Sample material Seawater containing a marine chrysophyte  

Strain CCCM811  
Genus Lotharella  
Species globosa  
Family Chlorarachniaceae  
Superkingdom Eukaryota  
Class Chlorarachniophyceae  
Phylum Cercozoa