Sample: MMETSP0120


Sample Name MMETSP0120 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Kryptoperidinium foliaceum CCMP 1326

Sample Accession CAM_SMPL_002402
Assembly  
Combined Assembly Kryptoperidinium-foliaceum-CCMP1326
Taxon ID 160619

Ph 8  
Phosphate 36.2  
Nitrate 882  
Axenic No  
Trace elements 23000  
Experimental salinity 21  

Growth medium F/2-Si amended sea water  
Modifications to growth medium 48 hours before harvest antibiotics were added to medium: 500 mg/L penicillin; 200 mg/L ampicillin; 100 mg/L streptomycin; 100 mg/L neomycin  

NCBI SRA SRS618957  

Habitat name marine habitat  
Envo term for habitat primary term Acquatic: marine  
Envo term for habitat secondary term Other  
Habitat marine habitat  

Site name 32.9000N 117.2550W Scripps Institute of Oceanography, pier, La Jolla, California USA  
Country UNITED STATES  
Country US  
Sample collection site 32.9000N 117.2550W Scripps Institute of Oceanography, pier, La Jolla, California USA  

Project id 104  
Collection start time 1984-06-01 00:00:00.0  
Collection stop time 1984-06-01 00:00:00.0  
Volume unit L  
Clonal No  
Collection date 01-JUN-84  
Date of experiment 20-FEB-11  
External sample id Kryptoperidinium foliaceum light (Kf Light)  
Investigation type EU  
Principle investigator Patrick Keeling  
Primary citation Kempton, J. W., Wolny, J., Tengs, T. et al. 2002. Kryptoperidinium foliaceum blooms in South Carolina: a multianalytical approach to identification. Harmful Algae 1: 383–92.; Dodge JD (1971) A dinoflagellate with both a mesokaryotic and a eukaryotic nu  
Primary citation Kempton, J. W., Wolny, J., Tengs, T. et al. 2002. Kryptoperidinium foliaceum blooms in South Carolina: a multianalytical approach to identification. Harmful Algae 1: 383–92.; Dodge JD (1971) A dinoflagellate with both a mesokaryotic and a eukaryotic nuc  
Volume filtered 2  

GenBank BioSample 2740060  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP012/MMETSP0120.fastq.tar  

Day portion of day night cycle in hours 12  
Light 550  
Experimental temperature 22  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001168  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000220  
Combined assembly name Kryptoperidinium-foliaceum-CCMP1326  
Pcr amp No  

Source mat id (MMETSP0120) Kryptoperidinium foliaceum - Seawater  
Source mat id 2877  
Source mat id CAM_BM_002422  
Source mat id CAM_SMPL_002402  
Sample type eukaryotes  
Sample description Kryptoperidinium foliaceum CCMP 1326  
Sample name MMETSP0120  
Sample volume 2  
Taxon id 160619  
Sample material Seawater  

Strain CCMP 1326  
Genus Kryptoperidinium  
Species foliaceum  
Family Peridiniaceae  
Order Peridiniales  
Superkingdom Eukaryota  
Class Dinophyceae  
Phylum Dinophyta