Sample: MMETSP0008


Sample Name MMETSP0008 
Sample Type eukaryotes
Project Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)
Investigators (1)
URL N/A
Description

Prymnesium parvum Texoma1

Sample Accession CAM_SMPL_002335
Assembly  
Combined Assembly Prymnesium-parvum-Texoma1
Taxon ID 97485

Prey organism if applicable Uronema Ciliate  

Ph 8  
Axenic 1  
Experimental salinity 18  
Environmental salinity 5  

Growth medium f/2 amended seawater  

NCBI SRA SRS616863  

Habitat name freshwater habitat  
Habitat freshwater habitat  

Site name Lake Texoma, Oklahoma  
Latitude 33.98  
Longitude -96.67  
Country UNITED STATES  
Country US  
Sample collection site Lake Texoma, Oklahoma  

Project id 104  
Collection start time 2009-03-01 00:00:00.0  
Collection stop time 2009-03-01 00:00:00.0  
Volume unit L  
Clonal 1  
Collection date 01-MAR-09  
Date of experiment 16-NOV-10  
External sample id ParvCil  
Investigation type EU  
Principle investigator David Caron  
Additional citations This is an isolate from the Caron Lab Culture Collection  
Other experimental metadata available Chlorophyll - 574.4 ug/L  

GenBank BioSample 2740302  
Fastq file /iplant/home/shared/imicrobe/projects/104/transcriptomes/MMETSP000/MMETSP0008.fastq.tar  

Day portion of day night cycle in hours 12  
Light 150  
Experimental temperature 18  
Night portion of day night cycle in hours 12  

Library acc CAM_LIB_001101  
Sequencing method Illumina  
Dna type cDNA  
Assembly accession number CAM_ASM_000153  
Combined assembly name Prymnesium-parvum-Texoma1  
Pcr amp No  

Source mat id (MMETSP0008) Prymnesium parvum  
Source mat id 2810  
Source mat id CAM_BM_002355  
Source mat id CAM_SMPL_002335  
Sample type eukaryotes  
Sample description Prymnesium parvum Texoma1  
Sample name MMETSP0008  
Taxon id 97485  

Strain Texoma1  
Genus Prymnesium  
Species parvum  
Family Prymenesiaceae  
Order Prymnesiales  
Superkingdom Eukaryota  
Class Prymnesiophyceae  
Phylum Haptophyta