Sample: SIO_viral_metaG


Sample Name SIO_viral_metaG 
Sample Type metagenome
Project Comparative evaluation of methods to concentrate and purify wild ocean virus communities through replicated metagenomics
Investigators (0) N/A
URL N/A
Description
Sample Accession CAM_S_1336
Assembly  

Longhurst province CCAL  

Water depth 5  

Habitat name marine habitat  

Site name San Diego, CA  
Latitude 32.86667  
Longitude -117.25111  
Site description Scripp's Pier  
Site depth 5  
Sample depth 1  

Project id 93  
Collection start time 2009-04-07 00:00:00.0  
Collection stop time 2009-04-07 00:00:00.0  
Comments TFF (volume 50L) CsCl (volume 20L)  
Volume unit L  
Filter min 0.2  
Filter max 2.7  
Filter type 142mm Express Plus filter (Millipore Corp., Bellerica MA, cat #GPWP14250)  

Temperature 14.5  

Library acc CAM_LIB_000749  
Sequencing method pyrosequencing (454)  
Dna type gDNA  
Num of reads 162078  

Source mat id 2191  
Source mat id CAM_BM_1396  
Source mat id CAM_S_1336  
Source mat id sea water sample  
Sample type metagenome  
Sample name SIO_viral_metaG  
Sample volume 20  

Type #Seqs #BP Avg. Len. %GC Location
Reads  /iplant/home/shared/imicrobe/projects/93/samples/1568/CAM_S_1336.fa