Project Name Rat faecal viral metagenome 
Domain (1) viruses
Investigators (0) N/A
Institution FEDERAL INSTITUTE FOR RISK ASSESSMENT (BFR)
Project Code PRJNA242707
Project Type metagenome


The of this study was to analyse the viromes of 20 faecal samples of wild urban brown rats from Berlin, Germany with subsequently whole genome characterization of a group A rotavirus.


No assemblies.


Type Location
Meta  /iplant/home/shared/imicrobe/projects/144/sample-attr.tab
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3291/SRR1438002.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3292/SRR1438003.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3295/SRR1438006.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3298/SRR1438009.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3289/SRR1438000.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3290/SRR1438001.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3299/SRR1438010.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3294/SRR1438005.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3306/SRR1438030.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3296/SRR1438007.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3297/SRR1438008.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3300/SRR1438011.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3293/SRR1438004.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3304/SRR1438015.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3301/SRR1438012.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3302/SRR1438013.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3287/SRR1437997.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3288/SRR1437999.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3305/SRR1438016.fasta
Reads  /iplant/home/shared/imicrobe/projects/144/samples/3303/SRR1438014.fasta